I am having a custom ATA case spec'd right now. Here's the idea I came up with:
it'll hold the Kemper, the Kemper remote and a spot for cables, strings, additional gig paraphernalia. The remote will slide down vertically so the fattest end is on the bottom. This way, depending on the stage size, my Remote can be on my larger pedal board or just directly on the floor. Either way, since I have a hard case for my pedal board it is always transported with good protection.